人員 研究人員 趙淑妙 主任/特聘研究員

趙淑妙 特聘研究員

實驗室主持人

Dr.趙淑妙

特聘研究員

PhD–Tulane University, USA, 1985

[ email ]

辦公室: 跨領域 A202

電話:+886-2-2787-1155
研究領域
  • 種子植物之分子親緣關係研究
  • 粒線體與葉綠體之基因體演化
  • 比較基因體學

研究方向

  • 1.針葉樹的葉綠體比較基因體學
    針葉樹具極大的生態與經濟價值，但他們的葉綠體之生物工程仍未被發展。研究針葉樹的葉綠體基因體結構，將有助其生物工程進展。目前，我們專研針葉樹葉綠體基因體的結構多樣性機制。本實驗室結合次世代定序和比較基因體學的方法，解析柏類針葉樹植物葉綠體基因體的高度變異及演化趨勢，其遺失逆轉重覆片段的演化過程、以及其基因體之高頻率重組的適應性意義。
  • 2.裸子植物的粒線體基因體演化
    裸子植物有1,000餘種，至今僅台東蘇鐵的粒線體被完全解序。裸子植物與種子植物之起源有密切關係。相較於葉綠體基因體，粒線體基因體的演化甚為複雜，具有水平基因轉移特性，能接納葉綠體及細胞核的DNA序列。此外，粒線體基因體的大小變異頗大，含豐富的重複片段，快速的基因重組率，其轉位外顯子與RNA修飾位點皆多於葉綠體基因體。我們目前正在定序及組裝裸子植物之粒線體基因體，包括: 銀杏、買麻藤植物及松柏類等。

最新發表

期刊論文 ( 2016 - 2021 )

  1. Wu Chung-Shien, Sudianto Edi, Chaw Shu-Miaw*, accepted, “Tight Association of Genome Rearrangements With Gene Expression in Conifer Plastomes”, BMC Plant Biology, DOI: 10.21203/rs.3.rs-101511/v1. (SCIE) (IF: 3.497; SCIE ranking: 16.2%) Link
  2. Lo Yun-Hua, Cheng Hsueh-Chien, Hsiung Chia-Ni, Yang Show-Ling, Wang Han-Yu, Peng Chia-Wei, Chen Chun-Yu, Lin Kung-Ping, Kang Mei-Ling, Chen Chien-Hsiun, Chu Hou-Wei, Lin Chiao-Feng, Lee Mei-Hsuan, Liu Quintin, Satta Yoko, Lin Cheng-Jui, Lin Marie, Chaw Shu-Miaw, Loo Jun-Hun, Shen Chen-Yang, Ko Wen-Ya, 2020, “Detecting Genetic Ancestry and Adaptation in the Taiwanese Han People”, Molecular Biology and Evolution, msaa276. (SCIE) (IF: 11.062; SCIE ranking: 6.1%,7.8%,3.9%) Link
  3. Wu Chung-Shien, Sudianto Edi, Hung Yu-Mei, Wang Bo-Cyun, Huang Chiun-Jr, Chen Chi-Tsong*, Chaw Shu-Miaw*, 2020, “Genome skimming and exploration of DNA barcodes for Taiwan endemic cypresses”, SCIENTIFIC REPORTS, 10(1), 20650. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link
  4. Sudianto E, Wu CS, Chaw SM*, 2020, “The origin and evolution of plastid genome downsizing in Southern Hemispheric cypresses (Cupressaceae)”, Frontiers in Plant Science, 11,901. (SCIE) (IF: 4.402; SCIE ranking: 8.1%) Link
  5. Chaw SM, Tai JH, Chen SL, Hsieh CH, Chang SY, Yeh SH, Yang WS, Chen PJ, Wang HY, 2020, “The origin and underlying driving forces of the SARS-CoV-2 outbreak.”, Journal of biomedical science, 27(1), 73. (SCIE) (IF: 5.762; SCIE ranking: 24.1%,12.2%) Link
  6. Fu CN, Wu CS, Ye LJ, Mo ZQ, Liu J, Chang YW, Li DZ, Chaw SM*, Gao LM*, 2019, “Prevalence of isomeric plastomes and effectiveness of plastome super-barcodes in yews (Taxus) worldwide.”, Scientific Reports, 9, 2773. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link
  7. Chaw SM, Liu YC, Wu YW, Wang HY, Lin CI, Wu CS, Ke HM, Chang LY, Hsu CY, Yang HT, Sudianto E, Hsu MH, Wu KP, Wang LN, Leebens-Mack JH, Tsai IJ, 2019, “Stout camphor tree genome fills gaps in understanding of flowering plant genome evolution.”, Nature plants, 5(1), 63-73. (SCIE) (IF: 13.256; SCIE ranking: 1.3%) Link
  8. Sudianto E, Chaw SM*, 2019, “Two Independent Plastid accD Transfers to the Nuclear Genome of Gnetum and Other Insights on Acetyl-CoA Carboxylase Evolution in Gymnosperms.”, Genome biology and evolution, 11(6), 1691-1705. (SCIE) (IF: 3.462; SCIE ranking: 35.3%,34.8%) Link
  9. Sudianto E, Wu CS, Leonhard L, Martin WF, Chaw SM*, 2018, “Enlarged and highly repetitive plastome of Lagarostrobos and plastid phylogenomics of Podocarpaceae”, Molecular Phylogenetics and Evolution, 133,24-32. (SCIE) (IF: 3.496; SCIE ranking: 33.3%,41.4%,34.3%) Link
  10. Wu CS, Wang TJ, Wu CW, Wang YN, SM Chaw*, 2017, “Plastome Evolution in the Sole Hemiparasitic Genus Laurel Dodder (Cassytha) and Insights into the Plastid Phylogenomics of Lauraceae”, GENOME BIOLOGY AND EVOLUTION, 9(10), 2604-2614. (SCIE) (IF: 3.462; SCIE ranking: 35.3%,34.8%) Link
  11. Qu XJ, Wu CS, Chaw SM*, Yi TS*, 2017, “Insights into the Existence of Isomeric Plastomes in Cupressoideae (Cupressaceae)”, Genome Biology and Evolution, 9(4), 1110–1119. (SCIE) (IF: 3.462; SCIE ranking: 35.3%,34.8%) Link
  12. Qu XJ, Jin JJ, Chaw SM, Li DZ*, Yi TS*, 2017, “Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae)”, SCIENTIFIC REPORTS, 7, 41005. (SCIE) (IF: 3.998; SCIE ranking: 23.9%) Link
  13. Chung-Shien Wu, Shu-Miaw Chaw*, 2016, “Large-Scale Comparative Analysis Reveals the Mechanisms Driving Plastomic Compaction, Reduction, and Inversions in Conifers II (Cupressophytes)”, Genome Biology and Evolution, 8(12), 3740-3750. (SCIE) (IF: 3.462; SCIE ranking: 35.3%,34.8%) Link
  14. Hsu CY, Wu CS, Chaw SM*, 2016, “Birth of four chimeric plastid gene clusters in Japanese umbrella pine.”, Genome Biology and Evolution, 8(6), 1776-1784. (SCIE) (IF: 3.462; SCIE ranking: 35.3%,34.8%) Link
  15. Sudianto E, Wu CS, Lin CP, Chaw SM*, 2016, “Revisiting the plastid phylogenomics of Pinaceae with two complete plastomes of Pseudolarix and Tsuga.”, Genome Biology and Evolution, 8(6), 1804-1811. (SCIE) (IF: 3.462; SCIE ranking: 35.3%,34.8%) Link
主編之專書(論文集) ( 2016 - 2021 )
  1. Shu-Miaw Chaw, Robert Jansen [editors], 2018, Evolution of Plastid Genome, ABR 85, 446 pages, UK: Elsevier Publishing Co.. Link
他類論文 ( 2016 - 2021 )
  1. Chaw SM*, Wu CS, Sudianto E, 2018, “Evolution of gymnosperm plastomes”, Chaw SM & R K Jansen (Editors). Plastid Genome Evolution. ISBN: 9780128134573, Academic Press., Chapter 7" 195-216.